1. Generally, students are allowed to record professors during lectures. Until the end of 12th grade, her IEP should allow her to record classes (and to have notes provided). Any persons she interviews for her TAG project should be recorded giving permission to record, at the beginning of the track. A smartpen (see below) could be used in the field, mainly to note "important" as she hears something that she wants to reference later, in the context of a running recording.
2. Take photos with her iPad of the relevant pages, using an OCR app (many free). I don't have a good handle on which apps are best, but do know that there are a lot of them out there (Evernote comes to mind). Import to word processor of choice.
AudioNote syncs recorded audio to typed notes. She could use it just to tag audio with quick reference words or phrases. A smartpen (like Livescribe) does the same kind of thing, but with handwritten notes instead of typewritten ones.
